Bali Medical Journal is indexed in the following databases:
- Web of Science (Clarivate Analytics)
- Scopus Elsevier
- HINARI Research in Health
- International Committee of Medical Journal Editors
- DOAJ Directory of Open Acces Journals
- SINTA - Science and Technology Index
- Portal Garuda
- Google Scholar
- DOI Crossref
- EBSCO Open Science Directory
- Sherpa/Romeo
- Ulrichsweb.com™ [Proquest]
- InCites Journal Citation Reports (Web of Science)
- Harvard Library
- Index Copernicus
- TROVE Australia
- DTU Findit
- Genamics
- ASEAN Citation Index (ACI)
- UDL-Edge (Malaysia)
- Scopus Citedness Analysis